Student Publications [Scholarly]

Student Publications [Scholarly]

 

This series contains a wide range of published scholarship and writing by students at Clark University. Many co-authored collaborations with Clark faculty are featured.

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Submissions from 2010

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Tumbling dynamics of passive flexible wings, Daniel Tam, John W.M. Bush, Michael Robitaille, and Arshad Kudrolli

Submissions from 2009

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Upper critical field in the organic superconductor β″ - (H2 CF2 SO3: Possibility of Fulde-Ferrell-Larkin-Ovchinnikov state, K. Cho, B. E. Smith, W. A. Coniglio, L. E. Winter, C. C. Agosta, and J. A. Schlueter

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Fungal ecology catches fire, David S. Hibbett, Anders Ohman, and Paul M. Kirk

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Climate and geographic trends in hatch delay of the treehole mosquito, Aedes triseriatus Say (Diptera: Culicidae), Camilo E. Khatchikian, John J. Dennehy, Christopher J. Vitek, and Todd Livdahl

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Dictyostelium discoideum CenB is a bona fide centrin essential for nuclear architecture and centrosome stability, Sebastian Mana-Capelli, Ralph Gräf, and Denis A. Larochelle

Submissions from 2008

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Formation and growth of oligomers: A monte carlo study of an amyloid tau fragment, Da Wei Li, Sandipan Mohanty, Anders Irbäck, and Shuanghong Huo

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A novel mutant cardiac troponin C disrupts molecular motions critical for calcium binding affinity and cardiomyocyte contractility, Chee Chew Lim, Haijun Yang, Mingfeng Yang, Chien Kao Wang, Jianru Shi, Eric A. Berg, David R. Pimentel, Judith K. Gwathmey, Roger J. Hajjar, Michiel Helmes, Catherine E. Costello, Shuanghong Huo, and Ronglih Liao

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Self-organized periodicity of protein clusters in growing bacteria, Hui Wang, Ned S. Wingreen, and Ranjan Mukhopadhyay

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Dictyostelium Sun-1 connects the centrosome to chromatin and ensures genome stability, Huajiang Xiong, Francisco Rivero, Ursula Euteneuer, Subhanjan Mondal, Sebastian Mana-Capelli, Denis Larochelle, Annette Vogel, Berthold Gassen, and Angelika A. Noegel

Submissions from 2007

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Evaluation of configurational entropy methods from peptide folding-unfolding simulation, Da Wei Li, Mina Khanlarzadeh, Jinbu Wang, Shuanghong Huo, and Rafael Brüschweiler

Submissions from 2006

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Penetration depth studies of organic and heavy fermion superconductors in the Pauli paramagnetic limit, C. C. Agosta, C. Martin, H. A. Radovan, E. C. Palm, T. P. Murphy, S. W. Tozer, J. C. Cooley, J. A. Schlueter, and C. Petrovic

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New results for superconductivity in κ-(BEDT-TTF) 2 Cu(NCS) 2 when an applied magnetic field is aligned parallel to the conducting planes, C. Martin, K. Cho, I. Mihut, T. Coffey, C. C. Agosta, S. W. Tozer, H. A. Radovan, E. C. Palm, T. P. Murphy, and J. A. Schlueter

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Incoherent Bragg reflection and Fermi-surface hot spots in a quasi-two-dimensional metal, I. Mihut, C. C. Agosta, C. Martin, C. H. Mielke, T. Coffey, M. Tokumoto, M. Kurmoo, J. A. Schlueter, P. Goddard, and N. Harrison

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Site-selective QPASS for the isolation of large quadrupolar coupling environments, Luis J. Smith and Christopher Seith

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Peptide plane can flip in two opposite directions: Implication in amyloid formation of transthyretin, Mingfeng Yang, Ming Lei, Boyan Yordanov, and Shuanghong Huo

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The sequence-dependent unfolding pathway plays a critical role in the amyloidogenicity of transthyretin, Mingfeng Yang, Boyan Yordanov, Yaakov Levy, Rafael Brüschweiler, and Shuanghong Huo

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Potential influence of Asp in the Ca2+ coordination position 5 of parvalbumin on the calcium-binding affinity: A computational study, Jingyan Zhao, Donald J. Nelson, and Shuanghong Huo

Submissions from 2005

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Geometry of crumpled paper, Daniel L. Blair and Arshad Kudrolli

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Magnetized Granular Materials, Daniel L. Blair and Arshad Kudrolli

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Critical field and Shubnikov-de Haas oscillations of κ-(BEDT-TTF)2Cu(NCS)2 under pressure, C. Martin, C. C. Agosta, S. W. Tozer, H. A. Radovan, T. Kinoshota, and M. Tokumoto

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Initial conformational changes of human transthyretin under partially denaturing conditions, Mingfeng Yang, Ming Lei, Rafael Bruschweiler, and Shuanghong Huo

Submissions from 2004

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Intrinsic versus mutation dependent instability/flexibility: A comparative analysis of the structure and dynamics of wild-type transthyretin and its pathogenic variants, Ming Lei, Mingfeng Yang, and Shuanghong Huo

Submissions from 2003

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Evolution of Gab family adaptor proteins, Tetteh Abbeyquaye, Juan Riesgo-Escovar, Thomas Raabe, and Justin R. Thackeray

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The identification of Pats1, a novel gene locus required for cytokinesis in Dictyostelium discoideum, Jonathan C. Abysalh, Lisa L. Kuchnicki, and Denis A. Larochelle

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Clustering transitions in vibrofluidized magnetized granular materials, Daniel L. Blair and A. Kudrolli

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Collision statistics of driven granular materials, Daniel L. Blair and A. Kudrolli

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Vortices in vibrated granular rods, Daniel L. Blair, T. Neicu, and A. Kudrolli

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Distinct phospholipase C-γ-dependent signaling pathways in the Drosophila eye and wing are revealed by a new small wing allele, Rishikesh Mankidy, Jeremy Hastings, and Justin R. Thackeray

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Phospholipase C-γ contains introns shared by src homology 2 domains in many unrelated proteins, Charlene M. Manning, Wendy R. Mathews, Leah P. Fico, and Justin R. Thackeray

Submissions from 2002

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Resistivity and penetration depth measurements of organic superconductors in high magnetic fields using a tunnel diode oscillator, C. C. Agosta, T. Coffey, Z. Bayindir, I. Mihut, C. Martin, and M. Tokumoto

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The study of the magnetic breakdown effect as a function of angle in the organic conductor K-(BEDT-TTF)2Cu(NCS)2 in high magnetic fields, I. Mihut, C. C. Agosta, C. H. Mielke, and M. Tokomoto

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Clustering, jamming and segregation in cohesive granular materials, Azadeh Samadani, Daniel L. Blair, and A. Kudrolli

Submissions from 2001

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Velocity correlations in dense granular gases, Daniel L. Blair and A. Kudrolli

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Trends and rates of microevolution in plants, Elizabeth Bone and Agnes Farres

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Swarming ring patterns in bacterial colonies exposed to ultraviolet radiation, Anna M. Delprato, Azadeh Samadani, A. Kudrolli, and L. S. Tsimring

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Larval rearing conditions affect kin-mediated cannibalism in a treehole mosquito, J. J. Dennehy, P. Robakiewicz, and T. Livdahl

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Angle of repose and segregation in cohesive granular matter, Azadeh Samadani and A. Kudrolli

Submissions from 2000

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Invasiveness, invasibility and the role of environmental stress in the spread of non-native plants, Peter Alpert, Elizabeth Bone, and Claus Holzapfel

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Measuring radio frequency properties of materials in pulsed magnetic fields with a tunnel diode oscillator, T. Coffey, Z. Bayindir, J. F. DeCarolis, M. Bennett, G. Esper, and C. C. Agosta

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Segregation transitions in wet granular matter, Azadeh Samadani and A. Kudrolli

Submissions from 1999

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Anomalous superconducting phase diagram of (BEDO-TTF)2ReO4·H2O, C. C. Agosta, S. Ivanov, Z. Bayindir, T. Coffey, N. D. Kushch, E. B. Yagubskii, T. Burgin, and L. K. Montgomery

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First record of Toxorhynchites rutilus (Diptera: Culicidae) in Massachusetts, J. J. Dennehy and T. Livdahl

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Intraguild predation among larval treehole mosquitoes, Aedes albopictus, Ae. aegypti, and Ae. triseriatus (Diptera: Culicidae), in laboratory microcosms, J. S. Edgerly, M. S. Willey, and T. Livdahl

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Size segregation of granular matter in silo discharges, Azadeh Samadani, A. Pradhan, and A. Kudrolli

Submissions from 1998

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Chemotropic and contact responses of Phytophthora sojae hyphae to soybean isoflavonoids and artificial substrates, Paul F. Morris, Elizabeth Bone, and Brett M. Tyler

Submissions from 1997

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Studies of the organic superconductor (BEDO)2ReO4H2O at high pressures and high magnetic fields, S. Ivanov, T. Coffey, C. C. Agosta, S. T. Hannahs, C. Immer, N. D. Kushch, and E. B. Yagubskii

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Electronic-transport studies of the organic metals α-(BET Hg(SCsand α-(BET KHg(SCsin high magnetic fields, where BETS is bis(ethylenedithio)tetraselenafulvalene, S. Ivanov, C. Mielke, T. Coffey, D. Howe, C. Agosta, B. Fravel, and L. Montgomery

Submissions from 1994

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New structure in the angular and field dependencies of the magnetoresistance of (BEDT-TTF)2TlHg(SCN)4, C. C. Agosta, S. A. Ivanov, C. H. Mielke, D. A. Howe, M. A. Antia, F. M. Morgan, V. N. Laukhin, and N. D. Kushch

Submissions from 1993

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Fermi surface and magnetic properties of low-dimensional organic conductors, J. S. Brooks, S. J. Klepper, C. C. Agosta, M. Tokumoto, N. Kinoshita, Y. Tanaka, S. Uji, H. Aoki, A. S. Perel, G. J. Athas, X. Chen, D. A. Howe, and H. Anzai

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The community ecology of Aedes egg hatching: implications for a mosquito invasion, JANICE S. EDGERLY, MICHELLE S. WILLEY, and TODD P. LIVDAHL

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Magnetic breakdown in the organic conductor (BEDT-TTF)2KHg(SCN)4, S. Uji, H. Aoki, J. S. Brooks, A. S. Perel, G. J. Athas, S. J. Klepper, C. C. Agosta, D. A. Howe, M. Tokumoto, N. Kinoshita, Y. Tanaka, and H. Anzai

Submissions from 1991

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Prospects for an invasion: Competition between Aedes albopictus and native Aedes triseriatus, Todd P. Livdahl and Michelle S. Willey

Submissions from 1986

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Cannibalism among Aedes triseriatus larvae, Robert K. Koenekoop and Todd P. Livdahl

Submissions from 1984

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The complex hatching response of Aedes eggs to larval density, Todd P. Livdahl, Robert K. Koenekoop, and Stephen G. Futterweit