Biology

A higher-level phylogenetic classification of the Fungi

Authors

David S. Hibbett, Clark UniversityFollow
Manfred Binder, Clark University
Joseph F. Bischoff, National Center for Biotechnology Information (NCBI)
Meredith Blackwell, Louisiana State University
Paul F. Cannon, CABI, United Kingdom
Ove E. Eriksson, Umeå Universitet
Sabine Huhndorf, Field Museum of Natural History
Timothy James, Duke University
Paul M. Kirk, CABI, United Kingdom
Robert Lücking, Field Museum of Natural History
H. Thorsten Lumbsch, Field Museum of Natural History
François Lutzoni, Duke University
P. Brandon Matheny, Clark University
David J. McLaughlin, University of Minnesota Twin Cities
Martha J. Powell, The University of Alabama
Scott Redhead, Agriculture and Agri-Food Canada
Conrad L. Schoch, Oregon State University
Joseph W. Spatafora, Oregon State University
Joost A. Stalpers, Westerdijk Fungal Biodiversity Institute - KNAW
Rytas Vilgalys, Duke University
M. Catherine Aime, USDA-ARS Systematic Mycology and Microbiology Laboratory
André Aptroot, ABL Herbarium
Robert Bauer, Eberhard Karls Universität Tübingen
Dominik Begerow, Max Planck Institute for Terrestrial Microbiology
Gerald L. Benny, University of Florida
Lisa A. Castlebury, USDA-ARS Systematic Mycology and Microbiology Laboratory
Pedro W. Crous, Westerdijk Fungal Biodiversity Institute - KNAW
Yu Cheng Dai, Institute of Applied Ecology, Chinese Academy of Sciences
Walter Gams, Westerdijk Fungal Biodiversity Institute - KNAW
David M. Geiser, Pennsylvania State University
Gareth W. Griffith, Aberystwyth University
Cécile Gueidan, Duke University

Document Type

Article

Abstract

A comprehensive phylogenetic classification of the kingdom Fungi is proposed, with reference to recent molecular phylogenetic analyses, and with input from diverse members of the fungal taxonomic community. The classification includes 195 taxa, down to the level of order, of which 16 are described or validated here: Dikarya subkingdom nov.; Chytridiomycota, Neocallimastigomycota phyla nov.; Monoblepharidomycetes, Neocallimastigomycetes class. nov.; Eurotiomycetidae, Lecanoromycetidae, Mycocaliciomycetidae subclass. nov.; Acarosporales, Corticiales, Baeomycetales, Candelariales, Gloeophyllales, Melanosporales, Trechisporales, Umbilicariales ords. nov. The clade containing Ascomycota and Basidiomycota is classified as subkingdom Dikarya, reflecting the putative synapomorphy of dikaryotic hyphae. The most dramatic shifts in the classification relative to previous works concern the groups that have traditionally been included in the Chytridiomycota and Zygomycota. The Chytridiomycota is retained in a restricted sense, with Blastocladiomycota and Neocallimastigomycota representing segregate phyla of flagellated Fungi. Taxa traditionally placed in Zygomycota are distributed among Glomeromycota and several subphyla incertae sedis, including Mucoromycotina, Entomophthoromycotina, Kickxellomycotina, and Zoopagomycotina. Microsporidia are included in the Fungi, but no further subdivision of the group is proposed. Several genera of 'basal' Fungi of uncertain position are not placed in any higher taxa, including Basidiobolus, Caulochytrium, Olpidium, and Rozella. © 2007 The British Mycological Society.

Publication Title

Mycological Research

Publication Date

5-2007

Volume

111

Issue

5

First Page

509

Last Page

547

ISSN

0953-7562

DOI

10.1016/j.mycres.2007.03.004

Keywords

AFTOL, Eumycota, Lichens, molecular phylogenetics, Mycota, nomenclature, systematics

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