Biology

Facile de Novo Sequencing of Tetrazine-Cyclized Peptides through UV-Induced Ring-Opening and Cleavage from the Solid Phase

Ariane Borges, Clark University
Chi Nguyen, Clark University
Madison Letendre, Clark University
Iryna Onasenko, Clark University
Rene Kandler, Clark University
Ngoc K. Nguyen, Clark University
Jue Chen, Clark University
Tamara Allakhverdova, Clark University
Emily Atkinson, Clark University
Bella DiChiara, Clark University
Caroline Wang, Clark University
Noa Petler, Clark University
Henna Patel, Clark University
Dhaval Nanavati, AbbVie
Samir Das, Clark University
Arundhati Nag, Clark University

Abstract

While most FDA-approved peptide drugs are cyclic, the robust cyclization chemistry of peptides and the deconvolution of cyclic peptide sequences by using tandem mass spectrometry render cyclic peptide drug discovery difficult. Here we present the successful design of cyclic peptides on solid phase that addresses both of these problems. We demonstrate that this peptide cyclization method using dichloro-s-tetrazine on solid phase allows successful cyclization of a panel of random peptide sequences with various charges and hydrophobicities. The cyclic peptides can be linearized and cleaved from the solid phase by simple UV light irradiation, and we demonstrate that accurate sequence information can be obtained for the UV-cleaved linearized peptides by using tandem mass spectrometry. The tetrazine linker used in the cyclic peptides can further be explored for inverse electron-demand Diels-Alder (IEDDA) reactions for screening or bioconjugation applications in the future.