Biology

The Abdominal-B promoter tethering element mediates promoter-enhancer specificity at the Drosophila bithorax complex

Omar S. Akbari, University of Nevada, Reno
Ben J. Schiller, Harvey Mudd College
Sara E. Goetz, Harvey Mudd College
Margaret C.W. Ho, Harvey Mudd College
Esther Bae, Western University of Health Sciences
Robert A. Drewell, Harvey Mudd College

Abstract

At the Drosophila bithorax complex many distinct classes of cis-regulatory modules work collectively during development to control gene expression. Abdominal-B (Abd-B) is one of three homeotic genes in the BX-C and is expressed in speciters, insulators, silencers, enhancers, promoter targeting sequences and the recently identified promoter tethering element (PTE). To activate gene expression at the endogenous complex, enhancers located >50 kb away must bypass intervening insulators to interact with the Abd-B promoter. The molecular mechanisms that allow enhancers to bypass insulators are not currently well understood. In this short article, we report on a novel mechanism for insulator bypass involving the PTE. In addition, we use bioinformatic analysis across twelve Drosophila genomes to identify putative cis-regulatory sequences that may be capable of facilitating specific promoter-enhancer interactions at the bithorax complex and propose a model for their molecular function during development. © 2007 Landes Bioscience.